PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028556887.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 214aa MW: 24289.7 Da PI: 8.6189

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028556887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.9	9.7e-08	39	67	21	48
TT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 21 ggtWktIartmg.kgRtlkqcksrwqkyl 48 g t+k + r mg +g+t +++ks++qky+ XP_028556887.1 39 GATPKGVLRVMGvQGLTIYHVKSHLQKYR 67 458*************************7 PP
2	G2-like	50.7	4e-16	40	68	27	55
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk +l++m+v+gLt++hvkSHLQkYRl XP_028556887.1 40 ATPKGVLRVMGVQGLTIYHVKSHLQKYRL 68 9***************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MHFPVLLSVF CLLFWSQITC RSYSFDRTNL RNSEICLPGA TPKGVLRVMG VQGLTIYHVK 60 SHLQKYRLAK YLPDSSAEGT KENKESDDVL SKLDNSSGMQ ITEALKLQME VQKRLHEQLE 120 VQRQLQLRIE AQGKYLKKII EEQQRLNGGV PQISADQCTE DKTVPSKSSL KDKSKTNFLH 180 SLSFEDSHHE PHTPETGSPL TSPKHELQVK GQMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	9e-53	G2-like family protein