PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.1155

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

DBB

Protein Properties

Length: 209aa MW: 23104.8 Da PI: 7.043

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.1155	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22	3.4e-07	3	33	4	34
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeH 34 ++C+ +e+ + lfC ++ lC +C + H evm.model.AsparagusV1_01.1155 3 TICDACESAAAVLFCAADEAALCTSCDHKVH 33 68*************************9988 PP
2	zf-B_box	27.1	8.4e-09	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 e ++C+ +e+ ++ ++Ce +++ lC +C + H g H evm.model.AsparagusV1_01.1155 52 EVPRCDICENAPAFFYCEIDGTSLCLQCDMIVHVGgkrsH 91 789***************************9995544556 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MRTICDACES AAAVLFCAAD EAALCTSCDH KVHMCNKLAS RHVRVGLADP SEVPRCDICE 60 NAPAFFYCEI DGTSLCLQCD MIVHVGGKRS HGRYLLLRQM VEFPGDIQSH VENGKDQNHE 120 LIMKERMQNH MVSAAAPLDA NSDGHGKIGT KMIDLNTRPY RTLGQASSSR VCILCIIIII 180 VIIFTVSTLH LRNRNFLTTN FIILFSHE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	2e-73	DBB family protein