PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1247
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 86aa    MW: 9936.97 Da    PI: 10.2677
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1247genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.7e-064662218
                                   HHHHHHHHHHHHHHHHH CS
                            HLH  2 rrahnerErrRRdriNs 18
                                   r +h+++E+rRR++iN 
  evm.model.AsparagusV1_01.1247 46 RSKHSAMEQRRRSKING 62
                                   899*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MEILSRSSEE DEDKYLRREG SSQRGDFTVR FDGKNAEQKQ QLLMPRSKHS AMEQRRRSKI  60
NGRSFDTLGL LKFQQNDGNS ESVRN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.31e-08bHLH family protein