PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1251
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family BBR-BPC
Protein Properties Length: 226aa    MW: 25516.8 Da    PI: 9.9743
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1251genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind276.61.2e-84122558301
                      GAGA_bind  58 maflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpi 137
                                    ma+ qrd+a++ern a++erdn+++al++ +           + +s+ ++ ++ +  + + le s  +         ++ 
  evm.model.AsparagusV1_01.1251   1 MALFQRDAAINERNSAIIERDNAIAALEYSRGR---------N-ISHHHHHQHQNIPHSSSLESSGSP---------YNH 61 
                                    7888***********************995443.........1.222222222222222333333333.........222 PP

                      GAGA_bind 138 eeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad.erskaekksidl.vlngvslDestlPvPvCsC 215
                                    + +++ +++ +++k  +++ + k++k++k+k+++++ +++ k++ +  ++ ++e+k  dl +ln+v +Des++PvPvCsC
  evm.model.AsparagusV1_01.1251  62 RGEVHINEQINEPK--AETVVSKKSKQRKNKRSNSELNNNLKPQDVIsKKHRKEWKVEDLgGLNEVVFDESSMPVPVCSC 139
                                    22222222222232..33345566666666666666666666665555999*********99****************** PP

                      GAGA_bind 216 tGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtn 295
                                    tG+ + CYkWGnGGWqSaCCtttiS+yPLPv++++r+aR+ grKmS+++f+klL+kLa+eG+dls p+DLkdhW kHGtn
  evm.model.AsparagusV1_01.1251 140 TGKYQPCYKWGNGGWQSACCTTTISMYPLPVMPNKRHARVNGRKMSGSVFTKLLSKLASEGHDLSMPLDLKDHWSKHGTN 219
                                    ******************************************************************************** PP

                      GAGA_bind 296 kfvtir 301
                                    +++ti+
  evm.model.AsparagusV1_01.1251 220 RYITIK 225
                                    *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MALFQRDAAI NERNSAIIER DNAIAALEYS RGRNISHHHH HQHQNIPHSS SLESSGSPYN  60
HRGEVHINEQ INEPKAETVV SKKSKQRKNK RSNSELNNNL KPQDVISKKH RKEWKVEDLG  120
GLNEVVFDES SMPVPVCSCT GKYQPCYKWG NGGWQSACCT TTISMYPLPV MPNKRHARVN  180
GRKMSGSVFT KLLSKLASEG HDLSMPLDLK DHWSKHGTNR YITIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.35e-65BBR-BPC family protein