PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.1278

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB_related

Protein Properties

Length: 206aa MW: 23394.3 Da PI: 10.2154

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.1278	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.5e-18	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T++Ed+l+++++ +lG++ W++Ia +++ gRt++++k++w+++ evm.model.AsparagusV1_01.1278 66 RGNFTQDEDDLIIKLHSLLGNK-WSLIAGRLP-GRTDNEIKNYWNTH 110 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDDRLVAHIQ ARARDAGVPT EGRRPPPLRQ SWRLRWINYL 60 RPDLKRGNFT QDEDDLIIKL HSLLGNKWSL IAGRLPGRTD NEIKNYWNTH IRRKLLSRGV 120 DPATHRPVTD RVSSNTTTIS FDKKGEEKSS SSEESPSSWY RVPDLNLELR ISPPVQSQLE 180 PVKSEAGGHS FFGLRTGVLD YRKGE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	2e-71	MYB family protein