PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1391
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HSF
Protein Properties Length: 231aa    MW: 25934.5 Da    PI: 6.6906
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1391genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.52.4e-34121022101
                                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS
                   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 
                                    F+ k+y++++d+e++ +i w +++nsfvv d+  f++++Lp +Fkhsnf+SFvRQLn+YgF+kv+ ++         weF
  evm.model.AsparagusV1_01.1391  12 FVVKTYKMVSDPETDAIICWGRESNSFVVADPFAFSQSLLPAHFKHSNFSSFVRQLNTYGFRKVDPDK---------WEF 82 
                                    9****************************************************************999.........*** PP

                                    EESXXXXXXXXXXXXXXXXX CS
                   HSF_DNA-bind  82 khksFkkgkkellekikrkk 101
                                    +h sF kg+++ll++i r++
  evm.model.AsparagusV1_01.1391  83 AHASFLKGQTHLLRHIVRRA 102
                                    ******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MEKFGDLGVA PFVVKTYKMV SDPETDAIIC WGRESNSFVV ADPFAFSQSL LPAHFKHSNF  60
SSFVRQLNTY GFRKVDPDKW EFAHASFLKG QTHLLRHIVR RAPVTSSSSS SSKKATDPYE  120
IDDGIILDLL TLKQQQSSID EKVQKMWSRL QETERKPKQM LAFLMKVVRD PTMVERSTAR  180
KRARLRLEEA RDDVLALKVE DLGGVDGFGA DGIFSATLEE LLGLGDGDEF *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.18e-58HSF family protein