PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.14
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 123aa    MW: 12779.9 Da    PI: 8.2424
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.14genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.32.8e-0599121223
                                  EETTTTEEESSHHHHHHHHHH.T CS
                      zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                                  +C+ C+++F++   L++H +  H
  evm.model.AsparagusV1_01.14  99 TCKSCSRTFNSDTALESHTKAkH 121
                                  7*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MSDSDDEDDT DEDESSEEED EATPKKATTG KRPAESASKT PVPEKKAKVV TPAKGQKSGG  60
DGKKNVHIAT PHPAKQAGKT PGNSDKSKQK SPKSAGSVTC KSCSRTFNSD TALESHTKAK  120
HG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.16e-22C2H2 family protein