PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1400
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 125aa    MW: 13420.3 Da    PI: 5.8689
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1400genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000251739123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                   + Cp+C+ sFs  s+   Hi ++
  evm.model.AsparagusV1_01.1400 17 FNCPICSSSFSLESEVSDHIDLC 39
                                   78*****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MITTSNRSTT GSSSAVFNCP ICSSSFSLES EVSDHIDLCL TTTNSNAKTP IESSIVAESV  60
SLYVSNQPRK DLVDVVLRLL SNVAKEPGNE NFRRIRMGNP MIKEVVSEVN GGVELLKILG  120
FRIG*