PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1471
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 222aa    MW: 24586.6 Da    PI: 5.9427
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1471genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding322.9e-104186147
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                   +g+W+ eEd     +v +lG+ +W+ Ia+ +  gR++k+ck+rw + 
  evm.model.AsparagusV1_01.1471 41 KGPWSSEEDAVQSILVIKLGTWNWNFIAQGIA-GRSRKSCKLRWCNQ 86
                                   79******************************.***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MEEEEEEQVH EAVMIGDDDS ANVGGRASMA TTMEGREEKV KGPWSSEEDA VQSILVIKLG  60
TWNWNFIAQG IAGRSRKSCK LRWCNQLAPY AEGGHTGPPS NFKSYLQDSD FTNYVVSVTS  120
FSSSFKNYSD GDNLLLDTFH RYSVTPSTTK TPSPSTPSAG TSSPPTSPPT PHFLFLYSVH  180
NITIRVFIKV DDFDFHLLKL MWSAAAYLFV IKAKVLRGEK M*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09230.11e-20MYB family protein