PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1700
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 234aa    MW: 25145.5 Da    PI: 9.461
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1700genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.72.8e-131963347
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
                Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                   +WT+eE++ ++ + ++lG+g+W+ Iar +   Rt  q+ s+ qky
  evm.model.AsparagusV1_01.1700 19 AWTEEEHKMFLLGLRKLGKGDWRGIARNFVVSRTSTQVASHAQKY 63
                                   7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MISEVAELKN KSDKTSGVAW TEEEHKMFLL GLRKLGKGDW RGIARNFVVS RTSTQVASHA  60
QKYFIRQMNV HKRKKRTSLF DLMPNELEAQ NSNPAAAPLP LLEAEHESTS SNSNNPVPAP  120
SPGEVERAIP KPGTMPLPYV VVPCSPFFPF SYPMWGCYGA DVMANSMHSV VKPTAVHSAV  180
PINVGDVPSI SKLSLGGEPA GQMSFGSSER ISAFHRNNPT NGSGSSSSPI QAA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.14e-36MYB_related family protein