PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.1764

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CPP

Protein Properties

Length: 285aa MW: 31077.3 Da PI: 9.3016

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.1764	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.5	2.6e-13	55	93	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 + k+CnCk+s+ClkkYCeCf +++C+ C+C +C+N e+ evm.model.AsparagusV1_01.1764 55 KAKQCNCKNSQCLKKYCECFTTNTYCKG-CNCVNCHNVEN 93 789***********************.******875 PP
2	TCR	55.3	1.3e-17	137	176	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +++kgCnCkks ClkkYCeCf+ag Cse+CkC dCkN e evm.model.AsparagusV1_01.1764 137 RHHKGCNCKKSGCLKKYCECFQAGILCSENCKCLDCKNFE 176 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MDRGVQSASS PLSRQLDFAP SVSSSRSSIS TPLKSESPRS WTIPTFETKI VTPKKAKQCN 60 CKNSQCLKKY CECFTTNTYC KGCNCVNCHN VENDPARKDA IEAVLDRNPN AFRPKIDGSP 120 QAARDKENAG EPPLLVRHHK GCNCKKSGCL KKYCECFQAG ILCSENCKCL DCKNFEGSED 180 RKLLFSVDRG NSLTYIQKTA NAAISGATGS SGFFSLENRK RKSHHLLLGA AINSQPFHGN 240 GQASQANHLT GAQLSSSFTG IPVAHVIIPS PQSKLTYRYK SIFK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	224	KRKSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20110.1	8e-82	CPP family protein