PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.1852
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 179aa    MW: 19590.8 Da    PI: 4.4959
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.1852genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like44.63.1e-14130161133
                        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktil 33 
                                    k++++WtpeLH+rFv+aveqL G +kA+P++il
  evm.model.AsparagusV1_01.1852 130 KAKVDWTPELHRRFVQAVEQL-GVDKAVPSRIL 161
                                    6799*****************.*********98 PP
2Myb_DNA-binding24.75.4e-08133159226
                                    SSS-HHHHHHHHHHHHHTTTT..-HHH CS
                Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWkt 26 
                                      WT+e++ ++v+av+qlG +   +++
  evm.model.AsparagusV1_01.1852 133 VDWTPELHRRFVQAVEQLGVDkaVPSR 159
                                    67*****************88555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MLAVSPIRRS SNNNGDNNEG EFLLEDINFD DIFAGFENGD ILPDLEIDSS DIFADFSFSS  60
GEESVNTAAV PDQEKISCYQ NESRIEDKDV EVVSARKKEI DQKSASSEGG KGRKHTSATT  120
GGKESQGKKK AKVDWTPELH RRFVQAVEQL GVDKAVPSRI LXXXPPQYRQ PSAEISVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44190.15e-19G2-like family protein