PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.235
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 243aa    MW: 26788.6 Da    PI: 5.3249
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.235genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.7e-173684355
                           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+ +++g
  evm.model.AsparagusV1_01.235 36 FLGVRRRP-WGRYAAEIRDPTT---KGRHWLGTFDTAQEAAIAYDRAAISMKG 84
                                  56******.**********966...48***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MTSTTFLNPL SFLPSPPVPN PNERRGRRRS TEPGRFLGVR RRPWGRYAAE IRDPTTKGRH  60
WLGTFDTAQE AAIAYDRAAI SMKGAQARTN FIYVPLNVSQ TLATQNAPVL QHVSTDTTHV  120
ACSEPEPVID VANEFRFDED RGSGDLSSIV PESLLRSSSK DDASDHHNAA VGSSSGNFEE  180
NVWGGHVCNY YWPQEDLWGE DHLRALRELM VGGPVSESPS QVSQCRGMDG GDMFGLDYYS  240
MP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.13e-36ERF family protein