PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.2373
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HSF
Protein Properties Length: 289aa    MW: 33437.7 Da    PI: 4.851
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.2373genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.17.9e-35341242101
                                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS
                   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 
                                    Fl+k++e++ed+ +++++ ws++ nsf+v+d + fa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ ++         weF
  evm.model.AsparagusV1_01.2373  34 FLTKTFEMVEDPGTDQVVAWSRTRNSFIVWDANMFASALLPRYFKHNNFSSFIRQLNTYGFRKIDPDR---------WEF 104
                                    9********************999*****************************************999.........*** PP

                                    EESXXXXXXXXXXXXXXXXX CS
                   HSF_DNA-bind  82 khksFkkgkkellekikrkk 101
                                    +++ F  g+k+ll++ikr++
  evm.model.AsparagusV1_01.2373 105 ANEDFLGGQKHLLKNIKRRR 124
                                    ******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDASFATVKE EVEVERCPTP YGRPYTAWPH LPPFLTKTFE MVEDPGTDQV VAWSRTRNSF  60
IVWDANMFAS ALLPRYFKHN NFSSFIRQLN TYGFRKIDPD RWEFANEDFL GGQKHLLKNI  120
KRRRITTQNS NQNLELLHSE HESELQRLML DRNTIMLEIL NLRSQQQSSK AQLIQMEERI  180
QCTERKQRHT MAFLTKSMTS PSPMFIQQLL NVSCSGKKRR LPGSYTSDET EGSEATEEVI  240
WDELLSIEEG ESSGIVVGEV GEMAVEPSEW SEDVNELVEQ IEYLGYRV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123LKNIKRR
2121125KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.12e-72HSF family protein