PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.2431
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HB-other
Protein Properties Length: 124aa    MW: 14464.7 Da    PI: 10.0154
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.2431genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.83.8e-0855101753
                                    --HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
                       Homeobox   7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                                    ++k  +e+Le+ + +++ p+ +++  + + ++L+ ++V  WF  +R 
  evm.model.AsparagusV1_01.2431  55 LKKVHVETLERIYSRTKRPTNAMISSIVHLTNLPFKRVVKWFEDKRV 101
                                    5667899************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MSASLPDKIP QIIPEPETKL VESTPEPTEI VHEHEPDVKE PVHIKQTRWS MQKRLKKVHV  60
ETLERIYSRT KRPTNAMISS IVHLTNLPFK RVVKWFEDKR VEDGVPDHRV PFRRSEPETV  120
STR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.14e-37HB-other family protein