PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.2742
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family Trihelix
Protein Properties Length: 88aa    MW: 9900.2 Da    PI: 10.0442
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.2742genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.86.8e-096374273
                       trihelix 42 gferspkqCkekwenlnkrykkikegekkrts 73
                                     +rs++qCk++we+l  +ykki+ +e ++++
  evm.model.AsparagusV1_01.2742  6 NRKRSSNQCKKRWESLLSDYKKITIWEASNSA 37
                                   568************************99632 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MVGSENRKRS SNQCKKRWES LLSDYKKITI WEASNSASAY GPYSSLKPGR RRKLHLPYSF  60
DQQVFCSLDV VIKAQEARIA SSATDID*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.11e-11Trihelix family protein