PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.2745
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HB-other
Protein Properties Length: 176aa    MW: 19676.9 Da    PI: 10.427
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.2745genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox14.65.7e-0591146152
                                    TT--SS--HHHHHHHHHHHH.....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
                       Homeobox   1 rrkRttftkeqleeLeelFe.....knrypsaeereeLAkklgLterqVkvWFqNrR 52 
                                    +r Rt+f++eq e +  +F+     + ++ ++ e+e+  +++g++ ++VkvW +N +
  evm.model.AsparagusV1_01.2745  91 KRFRTKFSPEQKEKMR-AFAgrvgwRIHKKDEGEMERFCNEIGVSRQVVKVWMHNNK 146
                                    789***********96.5776887778999************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MRRPSGGHAS YPPCRNRPTD NSRNSRCRLI SASASAALLP PPNPNPNPNP IPNSQSSSEE  60
KNNGYVASVT ANVSNVEGYR VGLQSGEARK KRFRTKFSPE QKEKMRAFAG RVGWRIHKKD  120
EGEMERFCNE IGVSRQVVKV WMHNNKHLVT KKQDGDDQER EVKVEGEHQN QVDGV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.18e-24ZF-HD family protein