PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.2787
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 181aa    MW: 20364.5 Da    PI: 9.318
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.2787genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH352.5e-111765654
                                   HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                   + +E++RR +++s  ++L +l+Pk+ + p+  ls  + L +A +YIk L
  evm.model.AsparagusV1_01.2787 17 KVVEKNRRIHMKSLCFKLSSLIPKDHNFPKDALSQYDHLDQAADYIKTL 65
                                   689*********************76778888***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MKGGYGSGGS GAKIDRKVVE KNRRIHMKSL CFKLSSLIPK DHNFPKDALS QYDHLDQAAD  60
YIKTLRERIE SLKQRKKCAM GKEKYKEVGG EMSNEFGLPL IEVRHQDSIL EVILITGLKK  120
RFMFYEVIGV LEEEGAEVVN ASFSVVGDKI FYTIHSQAIS SRIGLEASRV SERLNELIQQ  180
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-31bHLH family protein