PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.2987

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

ERF

Protein Properties

Length: 331aa MW: 37970.3 Da PI: 4.6514

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.2987	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	6.8e-17	193	242	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 s ykGVr++ +g+W+AeIrdp +r +r +lg++ taeeAa+a+ +a++++ evm.model.AsparagusV1_01.2987 193 SLYKGVRRRA-WGKWAAEIRDP----IRkARRWLGTYNTAEEAAEAYREAARQIQ 242 57***777.******7....246********************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MAETNNKRER ENENEEEVPE AKRIREDLLF DILDDGSEPD NTDLDSVMRS LEKEIAIPAS 60 HLETKQPDLG FLLEASDDEL PTWRRRRWGL DQEAMSNSTR KKKEKKPSPQ QQVRRIRVIF 120 DDPDLTESSG DEEEEEEEKK PVEIEKTKRK RAVVEFSISW PKPFKNAPRP NKAKRVVAQL 180 RPTKAPSRPK RSSLYKGVRR RAWGKWAAEI RDPIRKARRW LGTYNTAEEA AEAYREAARQ 240 IQEEKIAIES NEGVENIKFS HSSPISVLDE PDPGTKAEDD PITEGLLCSC MADGEFDDLA 300 GLDFGFWGFK DADEIPSLDS IVLDWMDDKF *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	84	103	RRRRWGLDQEAMSNSTRKKK
2	85	104	RRRRWGLDQEAMSNSTRKKK
3	100	105	RKKKEK
4	148	174	KRKRAVVEFSISWPKPFKNAPRPNKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72360.1	1e-13	ERF family protein