PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3065
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 262aa    MW: 29048.4 Da    PI: 10.4097
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3065genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.32.7e-11555146
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                                   +++WT+eE+  l+ +++++G g W+tI +          R+  ++k++w++
  evm.model.AsparagusV1_01.3065  5 KQKWTAEEESALKAGIRKHGAGKWRTILKDPEfsgilCLRSNVDLKDKWRN 55
                                   79***********************************66**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MGAPKQKWTA EEESALKAGI RKHGAGKWRT ILKDPEFSGI LCLRSNVDLK DKWRNMSVVM  60
NGWGSREKGR IALKKSRQIP KHDDNPMALS TAVADSSDEI VDAKPLAMSA DAVQANAPNQ  120
SEAKLENLIL EAITNLKEPS GSNKTAIAMY IEDQYVSPPD FKRLLSAKLR RMTETRKLVK  180
VKRKYRIAPS SLYSEGRNSK VLLIDGRQRE HSRVDRDDIK HITKSQIDAY LARMRNMTPK  240
EAANAAALAI IPVLNGGDSC L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.12e-90MYB_related family protein