PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3073
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 165aa    MW: 18933.1 Da    PI: 10.5019
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3073genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3101.35.6e-3225116192
                                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                             B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                                    f+k+ tpsdv+k++rlv+pk++ae+h   k +s  l++ede g++W+++++y+++s++yvltkGW++Fvk++gLk+g +v
  evm.model.AsparagusV1_01.3073  25 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLKSGSLLLSFEDECGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLKAGGVV 104
                                    99************************55567899********************************************** PP

                                    EEEE-SSSEE.. CS
                             B3  81 vFkldgrsefel 92 
                                    vF+++  se++l
  evm.model.AsparagusV1_01.3073 105 VFRRSIGSEKQL 116
                                    ***763355544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MEKGPEEVKG RRLSGSARRP AEPLFEKTVT PSDVGKLNRL VIPKQHAEKH FPLKSGSLLL  60
SFEDECGKVW RFRYSYWNSS QSYVLTKGWS RFVKEKGLKA GGVVVFRRSI GSEKQLYIEC  120
KAEKPVQVIR LFGVNMFEVP VKRKETELFS VLEEERALLK RRCL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.23e-57RAV family protein