PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3136
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 162aa    MW: 18926.6 Da    PI: 9.7195
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3136genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM184.32.9e-57171451129
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratks 80 
                                    lppGfrFhPtdeel+++yL kkv + +++  ++i+e+d++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++
  evm.model.AsparagusV1_01.3136  17 LPPGFRFHPTDEELITYYLLKKVLDGSFTG-RAIAEIDLNKCEPWQLPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATDA 95 
                                    79*************************999.89***************99999*************************** PP

                            NAM  81 gyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                                    gyWkatgkd+e++s+ +g+lvg+kktLvfy+grapkgekt+Wvmheyrle
  evm.model.AsparagusV1_01.3136  96 GYWKATGKDREIYSSrTGSLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 145
                                    *************9878889****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MMEIGYGQQP EKNEEQLPPG FRFHPTDEEL ITYYLLKKVL DGSFTGRAIA EIDLNKCEPW  60
QLPEKAKMGE KEWYFFSLRD RKYPTGLRTN RATDAGYWKA TGKDREIYSS RTGSLVGMKK  120
TLVFYRGRAP KGEKTNWVMH EYRLEGKFAY HFLSRSSKCH H*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.12e-94NAC family protein