PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3169
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 210aa    MW: 23438.1 Da    PI: 4.8785
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3169genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.66.5e-10871301959
                                    SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY  19 efprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                    +  rsYY+C ++   gCp+kk v++++ ++  +++tY+ +H+++
  evm.model.AsparagusV1_01.3169  87 HGKRSYYKCVHHkerGCPAKKIVQQKSGNTPKFDVTYNLQHTCK 130
                                    567*******998999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MSAPTAPGTS EVSQPRGYSA VIEKVDRAHE LMSQLRAIVL SSPSADASFE LVRELFEDAF  60
GSFAIVLSKL KTCSNSRESD TDEQFSHGKR SYYKCVHHKE RGCPAKKIVQ QKSGNTPKFD  120
VTYNLQHTCK HRNSPHDRGF SLDGESFSSE IELQKLYLTC QKEDNVDSTV FTDFELEEML  180
LPCESGVDML HTADGAEPSE LSLWNFDMD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.21e-08WRKY family protein