PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.319
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 226aa    MW: 24814.5 Da    PI: 5.0089
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.319genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.43.9e-11129191158
                                   EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTE CS
                            B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgr 58 
                                   f+k+lt sd++++g +++p++ ae++       +  ++ s++l+ +d++g +W++++iyr+k+ +
  evm.model.AsparagusV1_01.319 129 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyaQ--QRPSQELVAKDLHGTEWRFRHIYRGKRTH 191
                                   99****************************9743..345679*****************988764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MTGIDLNTIE ALEEEAPAAA XXXXXHACAG PMISLPKKGS SVVYLTQGHF ETLGFSEGFR  60
SNVPAHVFCR VADVKLHADA ATDEVFAQLS LVPRCEEVEQ KLGEGEVEGD EEAEEFNGEN  120
RSSLMPHMFC KTLTASDTST HGGFSVPRRA AEDCFPPLDY AQQRPSQELV AKDLHGTEWR  180
FRHIYRGKRT HARVSCSSLE FTYATMFVYW GCGKLTEPSS KLGDA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.18e-68ARF family protein