PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.3276

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

C2H2

Protein Properties

Length: 294aa MW: 32666.3 Da PI: 6.9373

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.3276	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4.1e-05	122	141	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C C+k+F+r n++ H+ evm.model.AsparagusV1_01.3276 122 FSCAVCSKTFNRFNNMQMHM 141 89*****************9 PP
2	zf-C2H2	14.5	0.0001	211	233	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C CgksF + + ++H +++ evm.model.AsparagusV1_01.3276 211 FACRRCGKSFAVRGDWRTHEKNC 233 78*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MFPLYQLLTQ SSIMLSPSHH EEDEDHSVLL LTLWPPGQQN PNPSSTPPPS SSSSSYAAKQ 60 SVDRHDDGND DENNVTVSLS IGPPDDGGAN LGTDARTNND PAAPSHYWIP SAAEILVGAT 120 QFSCAVCSKT FNRFNNMQMH MWGHGSQYRK GTESLRLSTN LKPTSPSTLR LPCYCIAEGC 180 KNNINHPRSR PLKDFRTLQT HYKRKHCARP FACRRCGKSF AVRGDWRTHE KNCGRLWFCI 240 CGSDFKHKRS LKDHVRSFGG GHAPHIVESV AAMEVEDGHE EDGDEDVDDM VIY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-100	C2H2 family protein