PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3309
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 149aa    MW: 17201.6 Da    PI: 8.6327
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3309genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.2e-057092123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                   + C +Cgk F  + + ++H +++
  evm.model.AsparagusV1_01.3309 70 FMCRKCGKAFAVRGDWRTHEKNC 92
                                   89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MQMHMWGHGS QYRKGPESLR GIQPTAMLRL PCYCCAPGCR NNIDHPRSKP LKDFRTLQTH  60
YKRKHGIKPF MCRKCGKAFA VRGDWRTHEK NCGKRWYCIC GSDFKHKRSL KDHVKAFGHG  120
HAVHETDCLE EEEEDPSSEI EQDCEASQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.14e-86C2H2 family protein