PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3516
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 241aa    MW: 26571.3 Da    PI: 9.3584
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3516genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.19.9e-343286155
                        G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                                   kprlrWt +LHerFv+av+qLGG+ekAtPkti+++m+vkgLtl h+kSHLQkYRl
  evm.model.AsparagusV1_01.3516 32 KPRLRWTADLHERFVDAVAQLGGPEKATPKTIMRTMGVKGLTLFHLKSHLQKYRL 86
                                   79****************************************************8 PP
2Myb_DNA-binding71.51.3e-223485148
                                   TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                                   r+rWT++++e++vdav+qlGg+   t+ktI+rtmg kg+tl ++ks++qky+
  evm.model.AsparagusV1_01.3516 34 RLRWTADLHERFVDAVAQLGGPekaTPKTIMRTMGvKGLTLFHLKSHLQKYR 85
                                   89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MFSGLIQRQE SSIPAQDEIH GGPSLVLTAD PKPRLRWTAD LHERFVDAVA QLGGPEKATP  60
KTIMRTMGVK GLTLFHLKSH LQKYRLGKQS GKEMSEQSKD ASYLLETPSS SALSPRLPTP  120
DANEGQEVKE ALRAQMEVQR RLHEQVEVQK HVQIRMDAYH KYIDSLLDKA CKIAHEQISS  180
SGLNSPLMCS SSVPLSPSSL HQITVGGITL QSPESKSSLS SIGEGQFFYQ KSPELKRKLT  240
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.19e-74G2-like family protein