PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3638
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 76aa    MW: 8796.79 Da    PI: 7.5348
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3638genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.71.5e-091154344
                                   SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
                Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                                   +WT+   +l+ +a + +  +   +W+ +ar +g g+t++++k ++
  evm.model.AsparagusV1_01.3638 11 KWTAKQNKLFEKALAVYDQDspnRWENVARAVG-GKTREEVKRHF 54
                                   8*****************99*************.**********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MKEDDQSSGS KWTAKQNKLF EKALAVYDQD SPNRWENVAR AVGGKTREEV KRHFELLEED  60
IKQIESGRIP FPNYR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-35MYB_related family protein