PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.376

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bZIP

Protein Properties

Length: 155aa MW: 17545.8 Da PI: 9.6557

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.376	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.6	1.5e-09	28	73	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ +r+q+NRe+ArrsR RK++ ++ L + L +e ++ l+ evm.model.AsparagusV1_01.376 28 RKRKRMQSNRESARRSRMRKQKHLDDLMTQLNRLRQEKEQILTALS 73 6789*********************************998776555 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MSSGTSSGSS LSPGLGSDGD LKALMDQRKR KRMQSNRESA RRSRMRKQKH LDDLMTQLNR 60 LRQEKEQILT ALSITTQQYV GVEAENCVLR TQTMELSTRL QSLNEILYSM NANNTGNNWV 120 NTGNNWLNDN FINPWNLAIT NQPVLASIDM FQYC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	49	RKRKRMQSNRESARRSRMRKQK
2	41	48	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	2e-40	bZIP family protein