PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.405

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

HD-ZIP

Protein Properties

Length: 171aa MW: 19081.1 Da PI: 9.9947

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.405	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	38.9	1.5e-12	49	79	26	56
-HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 26 saeereeLAkklgLterqVkvWFqNrRakek 56 ++++e LA++l+L+ rqV vWFqNrRa+ k evm.model.AsparagusV1_01.405 49 VETQKEALASRLRLKPRQVEVWFQNRRARTK 79 57899************************98 PP
2	HD-ZIP_I/II	90.5	2e-29	43	113	19	89
HD-ZIP_I/II 19 eeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 ++e++ ++K++la++L+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++ +l++en+rL++eveeLr+ evm.model.AsparagusV1_01.405 43 PASEEMVETQKEALASRLRLKPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLSQENKRLQREVEELRA 113 566777889************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MGGFGISPLG LELTMAVPGS MSSSSVSEGV GYNITRDLDI NLPASEEMVE TQKEALASRL 60 RLKPRQVEVW FQNRRARTKL KQTEMECEYL KRCFGSLSQE NKRLQREVEE LRAMRVTPPT 120 ILSPQTRLPI PASALTMCPR CQRVTTAAPS AQNRRDGRRP LARGYIVVEC *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	74	82	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	3e-42	HD-ZIP family protein