PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.597
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 252aa    MW: 28077.2 Da    PI: 5.2325
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.597genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.92.2e-2073127357
                                   --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
                      Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                                   k++++t+eq++ Le  Fe + ++  e+++eLAkklgL+ rqV vWFqNrRa++k+
  evm.model.AsparagusV1_01.597  73 KKRRLTTEQVQLLEMSFETETKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKN 127
                                   56789************************************************95 PP
2HD-ZIP_I/II128.82.3e-4172164193
                   HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81 
                                   ekkrrl++eqv+lLE+sFe+e+kLeperK+ela++LglqprqvavWFqnrRAR+k+kqlE+ +++Lk+ayd+l +++e+L 
  evm.model.AsparagusV1_01.597  72 EKKRRLTTEQVQLLEMSFETETKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKNKQLERGFDRLKAAYDSLLADHESLL 152
                                   69******************************************************************************* PP

                   HD-ZIP_I/II  82 keveeLreelke 93 
                                   +++++Lr+++++
  evm.model.AsparagusV1_01.597 153 TDNARLRSQITT 164
                                   ********9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MDSGRLIFNS SSSSSSSRHG HMLFLGRSGN SIFQGGSWMA GMEEASANKR RPFFTTHEEL  60
LEEEYYDDQL PEKKRRLTTE QVQLLEMSFE TETKLEPERK TELAKKLGLQ PRQVAVWFQN  120
RRARWKNKQL ERGFDRLKAA YDSLLADHES LLTDNARLRS QITTLAEKLQ TKELTVAEPA  180
GESVTGSRMG GMVDGDSLQL VDSSSGSESY FHNTFSGHCI VEAVGGGGVH SEEDDGSDDG  240
CNIARSPLFC W*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121129RRARWKNKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.15e-66HD-ZIP family protein