PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.646
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 216aa    MW: 24102.7 Da    PI: 10.6896
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.646genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.19.9e-30158215258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                                    D+++WrKYGqK++kgs+fpr+YY+C+s  gCp++k+ver+ ++p+++++tYeg+H+h
  evm.model.AsparagusV1_01.646 158 TDECSWRKYGQKPIKGSPFPRGYYKCSSVrGCPARKHVERAVDEPSMLIVTYEGDHRH 215
                                   699************************988**************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MERLIFQLSQ QNSEIDCREI TNHTVSKFRK MISILNRTGH ARFRRGPSPP PEESPATPSP  60
AVNTPAISRP LTLDFPKMRI DGDKSSFSIP TPISSANSSF LSSITGDXXX XXXXXKKKCR  120
SHGSLIAGSC HCSMKRKSRV RRTIRVPAIS SKIADIPTDE CSWRKYGQKP IKGSPFPRGY  180
YKCSSVRGCP ARKHVERAVD EPSMLIVTYE GDHRH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-64WRKY family protein