PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.828
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GATA
Protein Properties Length: 235aa    MW: 25596 Da    PI: 7.7409
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.828genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.31.6e-16137173135
                          GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                                   C++Cg  k  Tp++Rrgpdg++tLCnaCGl ++ kg+
  evm.model.AsparagusV1_01.828 137 CQHCGIAKglTPMMRRGPDGPRTLCNACGLTWANKGT 173
                                   *********************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MIFSLLVMEG TPVTCLKDER LQVQAVLLLL GGHELPPDIS VMALPNNVNH RLSNDLPRPS  60
MNPHRIASIM RYREKRKNLC FDKKVLYDVR RDVASRMKRH KGQFASSKTN PEEALSPSSS  120
GDHAQSNSQE ESVSSFCQHC GIAKGLTPMM RRGPDGPRTL CNACGLTWAN KGTFRSLPQP  180
VTSGCQQSPI NPTDQSDAND SDISSNGQMF SAISNGPESS MIASIDAAME YADC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-45GATA family protein