PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.95
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 247aa    MW: 27583.3 Da    PI: 9.9077
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.95genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.62.6e-1999187197
                                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                                  f+k +++s+v+   +l lp kf++e+ +++e    ++lede+g++  v +   +++++  l++GW++F+ +++L++gD++vF
  evm.model.AsparagusV1_01.95  99 FIKPMVRSHVSGGFWLGLPTKFCKENFSPNEL--RVILEDEKGKEHAVLY--LGRKNG--LSGGWRGFAIDHNLEDGDVLVF 174
                                  89************************877555..7***************..555555..9********************* PP

                                  EE-SSSEE..EEEEE CS
                           B3  83 kldgrsefelvvkvf 97 
                                  +l++  +f  +v++ 
  evm.model.AsparagusV1_01.95 175 ELSEPARF--KVHIM 187
                                  *9765555..77775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MAAAAVEINS GEEILKERVR QNLKHLEEIG ISRDIVEFAR REYKLWADDP KQRYYRTSST  60
NANAAREYTG RIASEDQKIA ALKRAEEFQR DLTSHYPSFI KPMVRSHVSG GFWLGLPTKF  120
CKENFSPNEL RVILEDEKGK EHAVLYLGRK NGLSGGWRGF AIDHNLEDGD VLVFELSEPA  180
RFKVHIMKAI EGESPETDKT ADCAAAVSKT KASSGTKKAI QAVSKKRSLK TGSAKEALEA  240
TKRGRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.15e-42B3 family protein