PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.96
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 238aa    MW: 27095.9 Da    PI: 10.1556
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.96genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.62e-17101189197
                                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                                  f+k++++s+v+   +l lp kf++++   + ++  +tlede+g++ +v +   +++++  l++GW++F  ++ L++gD++vF
  evm.model.AsparagusV1_01.96 101 FIKAMVRSHVSGCFWLGLPFKFCNDNL--PSGELRMTLEDEKGKEHDVLY--LGRKNG--LSGGWRGFSIDHSLEDGDVLVF 176
                                  89*********************8883..234568***************..555555..9********************* PP

                                  EE-SSSEE..EEEEE CS
                           B3  83 kldgrsefelvvkvf 97 
                                  +l++  +f  +v+++
  evm.model.AsparagusV1_01.96 177 ELTQAARF--KVHIV 189
                                  *9987777..77765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MAAVVAEIDI SEEIIKQRVR ENLKLLEELG ISKDIREFAK REYKLWVGDT KDRYYRKRTS  60
TNQNNAGREY TGRIVSDNQK AAAVKRAEEL QRDLKSHYPS FIKAMVRSHV SGCFWLGLPF  120
KFCNDNLPSG ELRMTLEDEK GKEHDVLYLG RKNGLSGGWR GFSIDHSLED GDVLVFELTQ  180
AARFKVHIVK ALEEEKTEKS MTPKKKREPV SQKRPPKTGS GKQAGSAPKR GRRCIEN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-40B3 family protein