PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1016
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 234aa    MW: 26023.9 Da    PI: 6.7868
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1016genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52.1e-12166211655
                                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    +++Er RR ri +++ +L+el+P+     +k  s a++L +Av++Ik+Lq
  evm.model.AsparagusV1_02.1016 166 SIAERERRTRISEKLRKLQELVPNM----DKQTSTADMLDLAVQHIKELQ 211
                                    689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MEVCGDHLMR QSSSPAGFFS QLMVDSGYAA TRSIGHYSHP VTNNIHTMPH TRLKSQLSFS  60
SQEPLSQISE NNDETDGNVA HSYVSNSFSI GSWDDTNSIA FSSPSNKRAK NSSEDFIKSL  120
SHIDSQFSLP TTSLEMAAVE NLFQAQQDSV AFKVRAKRGC ATHPRSIAER ERRTRISEKL  180
RKLQELVPNM DKQTSTADML DLAVQHIKEL QSQVQNLNQE QANCTCECKK ELP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.14e-63bHLH family protein