PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1127
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 134aa    MW: 13907.2 Da    PI: 8.2381
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1127genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.6e-05107129223
                                    EETTTTEEESSHHHHHHHHHH.T CS
                        zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                                    +C+ C+ksF++   L+ H +  H
  evm.model.AsparagusV1_02.1127 107 SCKSCSKSFNSDNALQAHTKAkH 129
                                    6*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
DMMEAMGDSD EDEDSGDDEE EESSEEEKEA TPKKSANGKK RPAESASKTP IPEKKAKVVT  60
PAGQKSGGDG KKNVHLATPH PAKQAGKTPA KSEKAKQQSP KSAGSVSCKS CSKSFNSDNA  120
LQAHTKAKHS GGK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.18e-21C2H2 family protein