PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1365
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family AP2
Protein Properties Length: 135aa    MW: 14397.8 Da    PI: 10.0762
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1365genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.66.3e-0833652455
                            AP2 24 e.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                   + ++ + k+++lg f+ta  Aa+a+++a+ k++g
  evm.model.AsparagusV1_02.1365 33 WlRN-CgKQVYLGGFDTAHAAARAYDRAAIKFRG 65
                                   2334.55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MIWRSEQPST RKSHITSQPF AKGLLCSDIP VVWLRNCGKQ VYLGGFDTAH AAARAYDRAA  60
IKFRGVVADS NFNLSARMLL FKIIQAALAA VGAPDNLVHV ITGFAETGQA LVLSVDKIIF  120
VGSPGVGKMV HVTC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.23e-09AP2 family protein