PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1658
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 262aa    MW: 28373.2 Da    PI: 6.3731
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1658genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-2085134255
                            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                    +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  evm.model.AsparagusV1_02.1658  85 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAVAYDQAALRFKG 134
                                    7********.**********94....45***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MGSKRPLPCD EQEEREENMS SFSRYSSSRA EQDASAMVSA FAHVISASSG EVEAENTAAS  60
LPEAHKEAAV KPDLEEQGAT TMRRHYRGVR QRPWGKWAAE IRDPKKAARV WLGTFDTAEA  120
AAVAYDQAAL RFKGTKAKLN FPERVQGRTD LSFLLTRGIP TEVPATNLSQ VSYPNLLQYA  180
QLLQSGRDED LSNVASGLYC TGKSLQFSSS SGTKVEGSNS SEEFLDFSLP HAAGSVSSSS  240
SSWSGHGDQK DKDRGGKQKD N*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.11e-36ERF family protein