PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1668
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 103aa    MW: 12054.3 Da    PI: 6.2743
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1668genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.71.5e-064664220
                                   HHHHHHHHHHHHHHHHHHH CS
                            HLH  2 rrahnerErrRRdriNsaf 20
                                   r +h+ +E+rRR++iN++f
  evm.model.AsparagusV1_02.1668 46 RSKHSTMEQRRRSKINDSF 64
                                   899**************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MEILSRSSEE DEDEYLRREG SSQRGDFIVR FDGKNAEQKQ QLLMPRSKHS TMEQRRRSKI  60
NDSFLLDDKT RQIFELVQDS INSSRHEVGH NGEKRGEDLK DK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.33e-08bHLH family protein