PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.1730

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 590aa MW: 66288.5 Da PI: 4.5703

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.1730	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.2	3.4e-49	12	147	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknra 77 lp GfrFhPtdeel+++yLk k++gk ++ + ++e+d++++ePwdLp+ +k+++ ew+fF++ d+kya++ r+nra evm.model.AsparagusV1_02.1730 12 LPLGFRFHPTDEELINYYLKSKINGKIKAADAAvVPEIDVCRFEPWDLPErsPIKSNDPEWFFFAPVDRKYANSGRSNRA 91 699********************996665545**********95346777888***************** PP NAM 78 tksgyWkatgkdkevlsk..kgel.....vglkktLvfykgrapkgektdWvmheyrl 128 t++gyWkatgkd+ + s+ + + vg+kktLvf++grapkg++t+W+mheyr evm.model.AsparagusV1_02.1730 92 TEAGYWKATGKDRLIRSRvsR--EkpavlVGMKKTLVFHRGRAPKGSRTNWIMHEYRT 147 ************99651..234566*************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MDETQSIPFH LLPLGFRFHP TDEELINYYL KSKINGKIKA ADAAVVPEID VCRFEPWDLP 60 ERSPIKSNDP EWFFFAPVDR KYANSGRSNR ATEAGYWKAT GKDRLIRSRV SREKPAVLVG 120 MKKTLVFHRG RAPKGSRTNW IMHEYRTVEP EFENGGDQGS FVLCRLFKKS EETLSPTPAK 180 SSPSSMSQRE DGLEEEFATS STRESPESHL QKELQPLPIT FNKQPADIRL ADEANYLVSH 240 PIKLEERHCN SNMTLDAGEW ETKNTGVEDP PLFDDLAQFL GPEYEHLFSD DLPQINSLTL 300 ISSDYGINSA DDQTQAQYQT SEQDSVSALL DAMLSTPEEY SADVADCRGE TEAVSDGQIS 360 MINDTDSCMS SYVDSEALRT QGGLGLETES TFYFQSMEIR NLPVRYSKFG EYSVGPANSI 420 GDNINIRHRN RENMTSSFAS SFNYPEQQGI AERRIRLQSS NQMKKISKQD NYINKMKLSK 480 AEEHEKNKAD EQTEDSEPTV IDNSEQFSSD EDETTSPKST LVSSSDEHEE LRLRTQQLQA 540 DNDFKLGSSS LRQEVPRVGS FPIVIVGVAV FVIFLLFAGT LVLLNSCAA*

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MDETQSIPFH LLPLGFRFHP TDEELINYYL KSKINGKIKA ADAAVVPEID VCRFEPWDLP  60
ERSPIKSNDP EWFFFAPVDR KYANSGRSNR ATEAGYWKAT GKDRLIRSRV SREKPAVLVG  120
MKKTLVFHRG RAPKGSRTNW IMHEYRTVEP EFENGGDQGS FVLCRLFKKS EETLSPTPAK  180
SSPSSMSQRE DGLEEEFATS STRESPESHL QKELQPLPIT FNKQPADIRL ADEANYLVSH  240
PIKLEERHCN SNMTLDAGEW ETKNTGVEDP PLFDDLAQFL GPEYEHLFSD DLPQINSLTL  300
ISSDYGINSA DDQTQAQYQT SEQDSVSALL DAMLSTPEEY SADVADCRGE TEAVSDGQIS  360
MINDTDSCMS SYVDSEALRT QGGLGLETES TFYFQSMEIR NLPVRYSKFG EYSVGPANSI  420
GDNINIRHRN RENMTSSFAS SFNYPEQQGI AERRIRLQSS NQMKKISKQD NYINKMKLSK  480
AEEHEKNKAD EQTEDSEPTV IDNSEQFSSD EDETTSPKST LVSSSDEHEE LRLRTQQLQA  540
DNDFKLGSSS LRQEVPRVGS FPIVIVGVAV FVIFLLFAGT LVLLNSCAA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	4e-69	NAC family protein