PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1744
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GRF
Protein Properties Length: 213aa    MW: 24200.6 Da    PI: 10.0735
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1744genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC61.81e-1979115137
                            WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrs 37 
                                    d+ep+rC+RtDGKkWRCsr++ +++k+CErH hrg++
  evm.model.AsparagusV1_02.1744  79 DPEPWRCKRTDGKKWRCSREASGDSKYCERHKHRGKK 115
                                    79*********************************86 PP
2QLQ45.91.7e-161045136
                            QLQ  1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                                   ++FT +Q q+L+ Q+l++ y+a++ P+P++L+++ +
  evm.model.AsparagusV1_02.1744 10 QPFTTSQRQELELQALIFNYMASGIPIPSHLILPFR 45
                                   69******************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MIMDFSRIRQ PFTTSQRQEL ELQALIFNYM ASGIPIPSHL ILPFRRNFSL QPISLHHSSK  60
VSSPPSLKKV SYGRRVEEDP EPWRCKRTDG KKWRCSREAS GDSKYCERHK HRGKKCFTKN  120
PAMPLFTSSS ACSSCSSFTP RPLALSSRPA EEEVKEEGEE HCFVFGADLR SKEAKRSPKS  180
PVPIASSVGR TREKRDKQEL TSDSIDLIFL GPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.19e-27GRF family protein