PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.1766

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 274aa MW: 30496.1 Da PI: 7.5003

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.1766	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	35.3	3.4e-11	13	48	1	37
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev 37 lppGfrFhPtdeelvv+yL++k++ ++l++ +i+e evm.model.AsparagusV1_02.1766 13 LPPGFRFHPTDEELVVHYLCRKATYQRLPA-PIIAER 48 79**********************999888.556665 PP
2	NAM	40.1	1.1e-12	88	128	89	128
NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 dk+v + +++ g+kk Lvfy+g+ap+g ktdW+mheyrl evm.model.AsparagusV1_02.1766 88 DKPVSPAgSKKPLGIKKALVFYSGKAPRGIKTDWIMHEYRL 128 4555554456779**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MGRSRDAEAE LNLPPGFRFH PTDEELVVHY LCRKATYQRL PAPIIAERRH CSDKGNGTSS 60 PRGTGNTLTG PAPTGQPAKD TGRQPAPDKP VSPAGSKKPL GIKKALVFYS GKAPRGIKTD 120 WIMHEYRLAD TNRSANKKGS LRLDDWVLCR LYNKKNNWEK MQKQKEQSSS FGETIDSLEA 180 ADDAISESIR SDIENDVFPP QVYQSQMSQV NEQPQMKKED SDWFMDLNLD DLQSSFGAFG 240 SSATGFDISN QDYFMQVLGS PMMKTSQNNL PPF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	1e-47	NAC family protein