PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1850
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 262aa    MW: 30043.7 Da    PI: 9.31
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1850genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.81.8e-3137854128
                            NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    ++kewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++++ ++e++g kk Lvfykg+ pkg+kt+W+mheyrl
  evm.model.AsparagusV1_02.1850   3 GDKEWYFFSSRDRKYPNGVRPNRAAASGYWKATGTDKPIVASrGNENIGFKKALVFYKGKPPKGVKTNWIMHEYRL 78 
                                    579************************************99867788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MFGDKEWYFF SSRDRKYPNG VRPNRAAASG YWKATGTDKP IVASRGNENI GFKKALVFYK  60
GKPPKGVKTN WIMHEYRLSE AKNKTNLRPV KLKDSPMRLD DWVLCRIYQK SSHLQEDSNG  120
IESPISNTHN STQENDLMMH KSFSLSELLN EADFSLLSRL HETPTELEMA PVLDKASFGY  180
TNLNHPFINM HPFSETESSS VSITENSLKR RRIGEEGPNY YPASKKINNN SWVYTNFPNQ  240
FDSQNFYSQH LLLNPQYGDA V*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1209213KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.13e-53NAC family protein