PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1865
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 262aa    MW: 29510.1 Da    PI: 6.1111
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1865genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM88.21.5e-27171583128
                            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.................kvkaeekewyfFskrd 65 
                                    pGf F+P+d  lv +yL+++++g  ++  + ++e+d+y++ePw+Lp+                   ++eek++ fF++r+
  evm.model.AsparagusV1_02.1865  17 PGFNFSPSDVHLVAFYLRRRISGVMIPS-SLVRELDVYSTEPWNLPAggllqpesegeysdlfgFPESEEKRMLFFTRRH 95 
                                    9*************************99.88***************668999999988877775334477899******* PP

                            NAM  66 kkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                                      +a++++ nr +  g W+   kdk+v++ +++++g +  ++f   g  ++ ++t+W+mhe+rl
  evm.model.AsparagusV1_02.1865  96 PISARSRKFNRNAGCGLWHCGSKDKDVKH-GSQVIGYRLQFTFRkMGVGNQKVHTNWIMHEFRL 158
                                    *****************************.9************9446888889*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
METQEGADDL RTLFRYPGFN FSPSDVHLVA FYLRRRISGV MIPSSLVREL DVYSTEPWNL  60
PAGGLLQPES EGEYSDLFGF PESEEKRMLF FTRRHPISAR SRKFNRNAGC GLWHCGSKDK  120
DVKHGSQVIG YRLQFTFRKM GVGNQKVHTN WIMHEFRLDK ETNIDSLVLC KIFKRKHGEE  180
GDTGGLGAVT ALSGVSDGGE EEEEKEGRLE KRRRVVESGG LQKGLMDGYA EESSLFSAVY  240
ESIFLDDAGI DASSSFFPFH F*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1211215KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.11e-25NAC family protein