PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1894
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 157aa    MW: 17855.3 Da    PI: 4.9882
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1894genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.43.3e-24351561124
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgkrknratk 79 
                                    lp Gf FhPt + ++ ++L++kv g +l++ + ike+d+y +eP +Lp +++ ++++w yfF+   +     +++ r+t 
  evm.model.AsparagusV1_02.1894  35 LPLGFLFHPTGDVVIRHFLRNKVLGAPLPI-NPIKEIDVYLFEPDELPITISDSDERWmYFFVYMTE-----ENSDRSTP 108
                                    699***************************.88***************8888888999788876655.....56799*** PP

                            NAM  80 sgyWkatgkdkevlsk.kgelvglkktLvfykg.rapkge.ktdWvmh 124
                                    +gyWk   +d+ +++  ++e +glk+t+++y++   p+g+ k +W+m+
  evm.model.AsparagusV1_02.1894 109 KGYWKLDVSDELIKDPdTKEIIGLKNTFIYYRKeLGPNGRyKIKWTMQ 156
                                    **************9967778**********6535677765999*996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MDSSSSSSPA VPSSPPSKSP SPLLPYNEDG THPCLPLGFL FHPTGDVVIR HFLRNKVLGA  60
PLPINPIKEI DVYLFEPDEL PITISDSDER WMYFFVYMTE ENSDRSTPKG YWKLDVSDEL  120
IKDPDTKEII GLKNTFIYYR KELGPNGRYK IKWTMQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.21e-19NAC family protein