PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.1896

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 387aa MW: 43317.5 Da PI: 5.35

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.1896	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.8	2.4e-28	7	140	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdiykvePwdLpk...kvkaeekewyfFskrdkkya...tgkr 73 pG++F+P+d+ l+++yL kk++g + le+ + i ++d+y++ePw+Lp+ ++ +++k++ fFs+r+ ++ t k+ evm.model.AsparagusV1_02.1896 7 PGIQFKPSDDLLLTFYLPKKIAGGRdsLEIPSYlICDFDVYSTEPWNLPArdfRYLTDNKDMLFFSPRHAISSrkgTAKN 86 8********************99553443345**********9546666668899999886663335667 PP NAM 74 knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +r++ g+W+ +gk+++v++ +++ vg k+ L+f + + k ++t+W+mhe++l evm.model.AsparagusV1_02.1896 87 VKRTAGCGFWNGKGKEQDVFC-GSRRVGYKTPLTFVSTEGGKRRNTNWIMHEFHL 140 788999***********.999*******99999999********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MAMLPYPGIQ FKPSDDLLLT FYLPKKIAGG RDSLEIPSYL ICDFDVYSTE PWNLPARDFR 60 YLTDNKDMLF FSPRHAISSR KGTAKNVKRT AGCGFWNGKG KEQDVFCGSR RVGYKTPLTF 120 VSTEGGKRRN TNWIMHEFHL KPAQNSNKFE SMVICRIHKK KTKEDREGGA DANSGVAAFI 180 EQEEQGTASA ATHVEERPLK RKRVEASSSL PPSSSSLPAF LPCKEAEAFD RLISTMDEKR 240 HTVFEQEEEV DGRQVTEMLL KEHEAMTNHF KAAAESGAAT SICEQAATYV EDRLLKRKWV 300 EGCSNFHDTE KTSTVNTEAP SQPSSSSPYL SSTWVCAPAL DSYEASSSLI DILPPTSQDH 360 WTWEDLEIDV GTVSYLDELM ECFSDS*

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MAMLPYPGIQ FKPSDDLLLT FYLPKKIAGG RDSLEIPSYL ICDFDVYSTE PWNLPARDFR  60
YLTDNKDMLF FSPRHAISSR KGTAKNVKRT AGCGFWNGKG KEQDVFCGSR RVGYKTPLTF  120
VSTEGGKRRN TNWIMHEFHL KPAQNSNKFE SMVICRIHKK KTKEDREGGA DANSGVAAFI  180
EQEEQGTASA ATHVEERPLK RKRVEASSSL PPSSSSLPAF LPCKEAEAFD RLISTMDEKR  240
HTVFEQEEEV DGRQVTEMLL KEHEAMTNHF KAAAESGAAT SICEQAATYV EDRLLKRKWV  300
EGCSNFHDTE KTSTVNTEAP SQPSSSSPYL SSTWVCAPAL DSYEASSSLI DILPPTSQDH  360
WTWEDLEIDV GTVSYLDELM ECFSDS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	7e-28	NAC family protein