PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.2062
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 162aa    MW: 17958.6 Da    PI: 9.9414
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.2062genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.54.9e-081965555
                                   HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                                   + + Er RRd++ + +  L++++P+++    ++ +   ++ +++ YIksL+
  evm.model.AsparagusV1_02.2062 19 ALQLERSRRDKMAEFYTVLQSMVPNLF----PRATRTRVVDETISYIKSLE 65
                                   5678*********************84....89****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MKEDGSEAAH PASLRKNEAL QLERSRRDKM AEFYTVLQSM VPNLFPRATR TRVVDETISY  60
IKSLEGVVTA LDSQKRAKKL HRRRNSSITI TVSNRTAFFA LRVAPGHGRF ARVIEVFEKH  120
KAEVLAATVV ASEDGCTDVT VTALLDGEES AERIKAELMT L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-09bHLH family protein