PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.270
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 180aa    MW: 20063.3 Da    PI: 8.8993
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.270genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.9e-1160101854
                                   HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                   + r+RR+ri ++f  L++l+P        K++ +++Le+A++Y+ksL
  evm.model.AsparagusV1_02.270  60 AARQRRNRISDRFRILKSLVPGG-----SKMDTVSMLEEAINYVKSL 101
                                   569******************95.....5****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MESYNYQQNP SPLLLTEEQN SSSSTSRRKT LTHDHPHERK PRNAKTRSTA KLSTDPQSVA  60
ARQRRNRISD RFRILKSLVP GGSKMDTVSM LEEAINYVKS LKAQIWLHQA EISMNLNEGS  120
NLNFPTTYYY SNDDGVNFQS EEMVGGSVSP SSPTLAPLPY CSFGGGGQEV NPSFSMTYY*