PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.380
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 197aa    MW: 21958.6 Da    PI: 8.6695
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.380genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.43.8e-2559120159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   l+Dg++WrKYGqK++ +++fprsY+rC ++   gC+++++v++s++dp+ +++tY g+H+++
  evm.model.AsparagusV1_02.380  59 LNDGHSWRKYGQKKIFNAKFPRSYFRCPHKydqGCKATRQVQQSEQDPSRFTVTYFGQHTCR 120
                                   58***************************99999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MVSFHSALKA LQDSGVKSQK HKRNENPLQI GRIQSAHAPG GQKTRSLPYS YTLTKSKSLN  60
DGHSWRKYGQ KKIFNAKFPR SYFRCPHKYD QGCKATRQVQ QSEQDPSRFT VTYFGQHTCR  120
DPFEVASSCI EEDPCTINFA SPSEFDANFE QPQLSTLKQG DSCEDVVGNT ATPGSSLSNC  180
FKFPEFGLSE MLSLLA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-28WRKY family protein